Kernel-Based Machine Learning for Efficient Simulations of Molecular Liquids

C Scherer and R Scheid and D Andrienko and T Bereau, JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 16, 3194-3204 (2020).

DOI: 10.1021/acs.jctc.9b01256

Current machine learning (ML) models aimed at learning force fields are plagued by their high computational cost at every integration time step. We describe a number of practical and computationally efficient strategies to parametrize traditional force fields for molecular liquids from ML: the particle decomposition ansatz to two- and three-body force fields, the use of kernel-based ML models that incorporate physical symmetries, the incorporation of switching functions close to the cutoff, and the use of covariant meshing to boost the training set size. Results are presented for model molecular liquids: pairwise Lennard- Jones, three-body Stillinger-Weber, and bottom-up coarse-graining of water. Here, covariant meshing proves to be an efficient strategy to learn canonically averaged instantaneous forces. We show that molecular dynamics simulations with tabulated two-and three-body ML potentials are computationally efficient and recover two-and three-body distribution functions. Many-body representations, decomposition, and kernel regression schemes are all implemented in the open-source software package VOTCA.

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